Protein Information

Protein ZmCA3P9
ZmCA3P9 is a protein in the CCAAT-HAP3 family.
Information
TF Name:	ZmCA3P9
Species:	Maize
TF Family:	CCAAT-HAP3
Gene Name(Synonym):	ZmCADR2
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

Overview of domains present in v5 transcripts
	CCAAT-Dr1	NF-YB	PF00125	PF00808
Zm00001eb142030_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d042196	DAPseq	sequence	fimo	position
Zm00001d042196	DAPseq	sequence	fimo	position
Zm00001d042196	ChIPseq	sequence	fimo	position
Zm00001d042196	PChIPseq	sequence	fimo	position

Zm00001eb142030_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MADHHHHHHHGHPPDGPGGAGDQLEVIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKC
HKEKRKTVNGDDVCCAFGALGFDDYVDPMRRYLHKYRELEGDRAASSRGGGGGPAGAADPASASAAAGPSPSAASAGHFM
FGAAMDRPDNNSSAGARPF

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00125
CCAAT-Dr1
PF00808
NF-YB
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Nucleotide Sequence
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GCACAAGCACAAAGAGAGGCCCCGA...

GRMZM2G473152_T01 from maize genome v3

Related TFome: pUT4711

Amino Acid Sequence
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MADHHHHHHHGHPPDGPGGAGDQLEVIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKC
HKEKRKTVNGDDVCCAFGALGFDDYVDPMRRYLHKYRELEGDRAASSRGGGGGPAGAADPASASAAAGPSPSAASAGHFM
FGAAMDRPDNNSSAGARPF

Nucleotide Sequence
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CACTCGCACGGATCACGGCCGGACG...

Zm00001d042196_T001 from maize genome v4

Amino Acid Sequence
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MADHHHHHHHGHPPDGPGGAGDQLEVIKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKC
HKEKRKTVNGDDVCCAFGALGFDDYVDPMRRYLHKYRELEGDRAASSRGGGGGPAGAADPASASAAAGPSPSAASAGHFM
FGAAMDRPDNNSSAGARPF

Nucleotide Sequence
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ATGGCCGATCACCACCACCACCACC...

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Protein ZmCA3P9

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmCA3P9 is the regulator

Interactions where ZmCA3P9 is the target
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Zm00001eb142030_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G473152_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d042196_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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